8669 hypothetical protein
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
8669 chr_11a hypothetical protein 176809 178465 + hypothetical protein

Synonyms

NCBI ID Ensembl Genomes exon ID
7444535 Thaps8669.1, Thaps8669.2

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0093

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0040
 0.39

Most Highly Correlated Transcripts

11489

hypothetical protein
0.9193

8038

hypothetical protein
0.8928

5038

DUF179
0.8906

3071

NA
0.8855

21713

UbiH
0.8833

6130

hypothetical protein
0.8825

7025

(Tp_Myb2R6) L-asparaginase_like superfamily
0.8797

7085

PI-PLCc_GDPD_SF superfamily
0.8786

6594

hypothetical protein
0.8772

22280

Ntn_hydrolase superfamily
0.8736

Conserved Domains

Not available

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_50037 PHATRDRAFT_50037 237881 319061 Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0000151 GO:0004842 GO:0008270 GO:0016567 -

GO:0000151

ubiquitin ligase complex

Details: 
A protein complex that includes a ubiquitin-protein ligase and other proteins that may confer substrate specificity on the complex.
GO Category: 
CC

GO:0004842

ubiquitin-protein ligase activity

Details: 
Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine.
GO Category: 
MF

GO:0008270

zinc ion binding

Details: 
Interacting selectively and non-covalently with zinc (Zn) ions.
GO Category: 
MF

GO:0016567

protein ubiquitination

Details: 
The process in which one or more ubiquitin groups are added to a protein.
GO Category: 
BP

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