9443 Peptidase_A22B superfamily
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
9443 chr_13 Peptidase_A22B superfamily 441102 443696 + Peptidase_A22B superfamily

Synonyms

NCBI ID Ensembl Genomes exon ID
7445757 Thaps9443.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0200

Most Highly Correlated Transcripts

40200

TRX_reduct
0.9176

13448

Sec1
0.8828

260861

AAA
0.8824

21788

hypothetical protein
0.8787

12836

EEP superfamily
0.8715

267979

HCO3_cotransp superfamily
0.8688

16114

PLN02350
0.8613

22967

PH-like superfamily
0.8605

35136

NA
0.8599

23601

hypothetical protein
0.8583

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Peptidase_A22B superfamily Signal peptide peptidase; The members of this family are membrane proteins. In some proteins this... - 206.424 4.81E-60 459 - 819 superfamily 260890

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_24547 PHATRDRAFT_24547 241799 195021 Not available Cre07.g332786.t1.2 AT1G05820.1 355083

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0006508 GO:0008233 GO:0016021 GO:0008717 GO:0004244 -

GO:0006508

proteolysis

Details: 
The hydrolysis of proteins into smaller polypeptides and/or amino acids by cleavage of their peptide bonds.
GO Category: 
BP

GO:0008233

peptidase activity

Details: 
Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid.
GO Category: 
MF

GO:0016021

integral component of membrane

Details: 
The component of a membrane consisting of gene products and protein complexes that have some part that penetrates at least one leaflet of the membrane bilayer. This component includes gene products that are buried in the bilayer with no exposure outside the bilayer.
GO Category: 
CC

GO:0008717

NA

Details: 
NA
GO Category: 
NA

GO:0004244

NA

Details: 
NA
GO Category: 
NA

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