6638 ANKThalassiosira pseudonana | Diatom Portal

Genome Browser

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
6638	chr_7	ANK	86972	88615	+	ANK

Synonyms

NCBI ID	Ensembl Genomes exon ID
7450633	Thaps6638.2, Thaps6638.1

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0467

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Thaps_bicluster_0070	0.44	0.00068 410

Most Highly Correlated Transcripts

11039 TLD 0.7083	9661 hypothetical protein 0.703	12149 hypothetical protein 0.7027	4062 hypothetical protein 0.7025	24870 hypothetical protein 0.6963	21449 hypothetical protein 0.694
36650 hypothetical protein 0.683	1005 hypothetical protein 0.6604	36183 (GPA1) G-alpha 0.6579	1505 hypothetical protein 0.6518

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
ANK superfamily		ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of...	-	89.365	2.60E-21	13 - 141	superfamily	238125
ANK superfamily		ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of...	-	89.365	2.60E-21	13 - 141	superfamily	238125

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available		Not available	Not available	Not available	Not available	Not available	Not available	477322

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

Add comment

Log in to post comments