36183 (GPA1) G-alpha
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
36183 chr_9 (GPA1) G-alpha 705718 706792 - G-alpha

Synonyms

NCBI ID Ensembl Genomes exon ID
7453060 Thaps36183.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0318

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0050
 0.45

Most Highly Correlated Transcripts

bd1885

(bd1885) NA
0.8578

bd1487

(bd1487) PLN02688
0.8557

36650

hypothetical protein
0.8344

4062

hypothetical protein
0.8331

bd1803

(bd1803) NA
0.8199

bd938

(bd938) PBP2_NikA_DppA_OppA_like superfamily
0.817

bd616

(bd616) NA
0.8014

bd1891

(bd1891) COG3899
0.8007

38231

(PETC2) PRK13474
0.7714

2523

hypothetical protein
0.7587

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
G-alpha Alpha subunit of G proteins (guanine nucleotide binding); The alpha subunit of G proteins contains... cl17170 435.417 1.25E-152 37 - 352 specific 206639
Ras_like_GTPase superfamily Rat sarcoma (Ras)-like superfamily of small guanosine triphosphatases (GTPases); Ras-like GTPase... - 435.417 1.25E-152 37 - 352 superfamily 266525
G_alpha G protein alpha subunit; Subunit of G proteins that contains the guanine nucleotide binding site - 406.963 4.52E-141 17 - 356 multi-dom 214595

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available Not available Not available 431895 Not available AT2G26300.1 322123

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0004871 GO:0007186 GO:0005509 -

GO:0004871

signal transducer activity

Details: 
Conveys a signal across a cell to trigger a change in cell function or state. A signal is a physical entity or change in state that is used to transfer information in order to trigger a response.
GO Category: 
MF

GO:0007186

G-protein coupled receptor signaling pathway

Details: 
A series of molecular signals that proceeds with an activated receptor promoting the exchange of GDP for GTP on the alpha-subunit of an associated heterotrimeric G-protein complex. The GTP-bound activated alpha-G-protein then dissociates from the beta- and gamma-subunits to further transmit the signal within the cell. The pathway begins with receptor-ligand interaction, or for basal GPCR signaling the pathway begins with the receptor activating its G protein in the absence of an agonist, and ends with regulation of a downstream cellular process, e.g. transcription.
GO Category: 
BP

GO:0005509

calcium ion binding

Details: 
Interacting selectively and non-covalently with calcium ions (Ca2+).
GO Category: 
MF

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