6667 CAS_like superfamily
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
6667 chr_7 CAS_like superfamily 167989 169653 + CAS_like superfamily

Synonyms

NCBI ID Ensembl Genomes exon ID
7446162 Thaps6667.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0103

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0007
 0.40

Most Highly Correlated Transcripts

bd687

(bd687) NA
0.8821

bd1949

(bd1949) NA
0.8573

bd208

(bd208) DUF3529
0.8459

bd624

(bd624) Glyco_transf_34 superfamily
0.8391

bd789

(bd789) ABC_ATPase superfamily
0.8287

bd1765

(bd1765) NA
0.8217

bd1078

(bd1078) NA
0.8214

1316

hypothetical protein
0.8205

bd1216

(bd1216) Delta6-FADS-like
0.8175

bd518

(bd518) p450 superfamily
0.8162

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
CAS_like superfamily Clavaminic acid synthetase (CAS) -like; CAS is a trifunctional Fe(II)/ 2-oxoglutarate (2OG)... - 98.2387 4.12E-23 330 - 540 superfamily 260242

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_49480 PHATRDRAFT_49480 262191 325206 451329 Not available Not available 566756

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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