6886 TPR_12
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
6886 chr_7 TPR_12 732657 734473 - TPR_12

Synonyms

NCBI ID Ensembl Genomes exon ID
7452281 Thaps6886.1, Thaps6886.2

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0490

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0007
 0.40

Most Highly Correlated Transcripts

4108

hypothetical protein
0.9139

bd812

(bd812) NA
0.8184

bd836

(bd836) Methyltransf_16 superfamily
0.8177

bd1075

(bd1075) NA
0.8021

bd1100

(bd1100) NA
0.7977

bd1871

(bd1871) NA
0.7533

bd1870

(bd1870) NA
0.7507

bd1880

(bd1880) NA
0.7506

263864

0.7403

bd1882

(bd1882) NA
0.7091

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
TPR_12 Tetratricopeptide repeat; Tetratricopeptide repeat. - 58.9278 8.92E-11 443 - 521 multi-dom 257749

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available Not available Not available Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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