6942 DUF89Thalassiosira pseudonana | Diatom Portal

Genome Browser

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
6942	chr_7	DUF89	872402	875355	+	DUF89

Synonyms

NCBI ID	Ensembl Genomes exon ID
7449234	Thaps6942.5, Thaps6942.2, Thaps6942.3, Thaps6942.1, Thaps6942.4

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0032

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Thaps_bicluster_0231	0.32	25 740

Most Highly Correlated Transcripts

270222 0.9399	1773 hypothetical protein 0.9269	26991 GRX_GRXh_1_2_like 0.9195	31829 CBS_like 0.9064	17214 PLN02512 0.9008	9776 hypothetical protein 0.9003
8872 hypothetical protein 0.8955	4465 hypothetical protein 0.8883	268192 Zip superfamily 0.8864	4876 hypothetical protein 0.885

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
DUF89		Protein of unknown function DUF89; This family has no known function.	cl15397	226.017	5.30E-67	421 - 762	specific	250982
DUF89 superfamily		Protein of unknown function DUF89; This family has no known function.	-	226.017	5.30E-67	421 - 762	superfamily	265686

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available	PHATRDRAFT_34014	PHATRDRAFT_34014	180243	203910	454898	Cre03.g154700.t1.1	Not available	250450

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

Add comment

Log in to post comments