6988 PTZ00401
Thalassiosira pseudonana

Chromosome Product Transcript Start End Strand Short Name
6988 chr_7 PTZ00401 979911 981374 + PTZ00401
NCBI ID Ensembl Genomes exon ID
7444129 Thaps6988.1
Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0016
Normalized Mean Residue
Thaps_bicluster_0142
0.24
VDE superfamily
0.9476
hypothetical protein
0.9468
violaxanthin de-epoxidase-like 1
0.9444
(bd208) DUF3529
0.9164
PRK05444
0.915
(bd1078) NA
0.9124
(NTT8) hypothetical protein
0.9107
(CYP2) p450 superfamily
0.9088
0.9081
(bd1306) NA
0.9079
Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
AsxRS_core Asx tRNA synthetase (AspRS/AsnRS) class II core domain. Assignment to class II aminoacyl-tRNA... cl00268 409.263 2.30E-140 157 - 482 specific 238399
class_II_aaRS-like_core superfamily Class II tRNA amino-acyl synthetase-like catalytic core domain. Class II amino acyl-tRNA... - 409.263 2.30E-140 157 - 482 superfamily 260313
AspRS_cyto_N AspRS_cyto_N: N-terminal, anticodon recognition domain of the type found in Saccharomyces... cl19106 111.886 8.79E-30 36 - 137 specific 239815
Asp_Lys_Asn_RS_N superfamily Asp_Lys_Asn_RS_N: N-terminal, anticodon recognition domain of class 2b aminoacyl-tRNA synthetases (... - 111.886 8.79E-30 36 - 137 superfamily 267459
PTZ00401 aspartyl-tRNA synthetase; Provisional - 467.162 1.22E-159 2 - 487 multi-dom 173592
T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_41016 PHATRDRAFT_41016 178869 300590 Not available Not available Not available Not available
KEGG description KEGG Pathway
Aminoacyl-tRNA biosynthesis map00970
GO:0004815 GO:0005524 GO:0006422 GO:0004812 GO:0005737 GO:0006418 GO:0003676 -

aspartate-tRNA ligase activity

Details: 
Catalysis of the reaction: ATP + L-aspartate + tRNA(Asp) = AMP + diphosphate + L-aspartyl-tRNA(Asp).
GO Category: 
MF

ATP binding

Details: 
Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
GO Category: 
MF

aspartyl-tRNA aminoacylation

Details: 
The process of coupling aspartate to aspartyl-tRNA, catalyzed by aspartyl-tRNA synthetase. In tRNA aminoacylation, the amino acid is first activated by linkage to AMP and then transferred to either the 2'- or the 3'-hydroxyl group of the 3'-adenosine residue of the tRNA.
GO Category: 
BP

aminoacyl-tRNA ligase activity

Details: 
Catalysis of the formation of aminoacyl-tRNA from ATP, amino acid, and tRNA with the release of diphosphate and AMP.
GO Category: 
MF

cytoplasm

Details: 
All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.
GO Category: 
CC

tRNA aminoacylation for protein translation

Details: 
The synthesis of aminoacyl tRNA by the formation of an ester bond between the 3'-hydroxyl group of the most 3' adenosine of the tRNA, to be used in ribosome-mediated polypeptide synthesis.
GO Category: 
BP

nucleic acid binding

Details: 
Interacting selectively and non-covalently with any nucleic acid.
GO Category: 
MF
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