7597 2A0111Thalassiosira pseudonana | Diatom Portal

Genome Browser

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
7597	chr_8	2A0111	642896	644567	+	2A0111

Synonyms

NCBI ID	Ensembl Genomes exon ID
7445608	Thaps7597.3, Thaps7597.4, Thaps7597.2, Thaps7597.1

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0213

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Thaps_bicluster_0178	0.28	0.061 0.92

Most Highly Correlated Transcripts

20664 hypothetical protein 0.9311	8599 hypothetical protein 0.9187	9880 SGNH_hydrolase superfamily 0.9158	8303 Glyco_trans_1_2 0.9137	7506 Uba3_RUB 0.9099	263558 Menin superfamily 0.9088
7516 Aldo_ket_red 0.9077	262271 PIP5K 0.9067	22877 SapB 0.9064	3354 hypothetical protein 0.9063

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
2A0111		oxalate/formate antiporter family transporter; This subfamily belongs to the major facilitator...	-	82.1097	2.95E-17	55 - 435	multi-dom	233171

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available		Not available	Not available	Not available	Not available	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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