8303 Glyco_trans_1_2
Thalassiosira pseudonana

Chromosome Product Transcript Start End Strand Short Name
8303 chr_10 Glyco_trans_1_2 248639 250046 - Glyco_trans_1_2
NCBI ID Ensembl Genomes exon ID
7447025 Thaps8303.1
Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0213
Normalized Mean Residue
Thaps_bicluster_0245
0.28
hypothetical protein
0.9339
NA
0.9334
(bd1777) NA
0.9331
DSPc superfamily
0.9289
hypothetical protein
0.9231
Uba3_RUB
0.9193
2A0111
0.9137
Peptidase_A22B superfamily
0.9137
ATPase-IIA1_Ca
0.9117
GpcrRhopsn4 superfamily
0.9111
Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Glyco_trans_1_2 Glycosyl transferases group 1; Glycosyl transferases group 1. cl19138 61.8408 5.57E-12 349 - 440 specific 257844
Glycos_transf_1 superfamily Glycosyl transferases group 1; Mutations in this domain of human PIGA lead to disease (Paroxysmal... - 61.8408 5.57E-12 349 - 440 superfamily 267491
T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_46968 PHATRDRAFT_46968 256229 287921 Not available Not available Not available Not available
KEGG description KEGG Pathway
Not available Not available
GO:0003735 GO:0005622 GO:0005840 GO:0006412 -

structural constituent of ribosome

Details: 
The action of a molecule that contributes to the structural integrity of the ribosome.
GO Category: 
MF

intracellular

Details: 
The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm.
GO Category: 
CC

ribosome

Details: 
An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins.
GO Category: 
CC

translation

Details: 
The cellular metabolic process in which a protein is formed, using the sequence of a mature mRNA molecule to specify the sequence of amino acids in a polypeptide chain. Translation is mediated by the ribosome, and begins with the formation of a ternary complex between aminoacylated initiator methionine tRNA, GTP, and initiation factor 2, which subsequently associates with the small subunit of the ribosome and an mRNA. Translation ends with the release of a polypeptide chain from the ribosome.
GO Category: 
BP
Log in to post comments