7842 (Tp_AP2-EREBP11) regulator [Rayko]
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
7842 chr_9 (Tp_AP2-EREBP11) regulator [Rayko] 33815 36380 + regulator [Rayko]

Synonyms

NCBI ID Ensembl Genomes exon ID
7444978 Thaps7842.4, Thaps7842.2, Thaps7842.1, Thaps7842.3

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0120

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0010
 0.38

Most Highly Correlated Transcripts

10331

hypothetical protein
0.8812

10403

MscS
0.8725

264905

FeFe_hydrog_A
0.8717

2035

hypothetical protein
0.8699

896

hypothetical protein
0.8687

25133

hypothetical protein
0.8518

12076

EPL1 superfamily
0.8444

8982

Reprolysin_3
0.8443

3704

PDEase_I
0.8415

25874

hypothetical protein
0.835

Conserved Domains

Not available

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available Not available Not available Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0003700 GO:0005634 GO:0006355 -

GO:0003700

sequence-specific DNA binding transcription factor activity

Details: 
Interacting selectively and non-covalently with a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex.
GO Category: 
MF

GO:0005634

nucleus

Details: 
A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.
GO Category: 
CC

GO:0006355

regulation of transcription, DNA-templated

Details: 
Any process that modulates the frequency, rate or extent of cellular DNA-templated transcription.
GO Category: 
BP

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