264905 FeFe_hydrog_A
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
264905 chr_23 FeFe_hydrog_A 254008 256317 + FeFe_hydrog_A

Synonyms

NCBI ID Ensembl Genomes exon ID
7448885 Thaps264905.2, Thaps264905.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0413

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0010
 0.38

Most Highly Correlated Transcripts

263610

COG3899
0.8798

20630

Piwi-like superfamily
0.8783

24852

hypothetical protein
0.8759

22947

zf-UBR
0.8735

262615

Syja_N
0.8735

262573

G_glu_transpept
0.8734

3704

PDEase_I
0.872

7842

(Tp_AP2-EREBP11) regulator [Rayko]
0.8717

3719

DECH_helic
0.8702

25600

hypothetical protein
0.8676

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Fe_hyd_lg_C superfamily Iron only hydrogenase large subunit, C-terminal domain; Iron only hydrogenase large subunit, C-... - 360.37 1.26E-118 294 - 572 superfamily 251611
Fe_hyd_lg_C superfamily Iron only hydrogenase large subunit, C-terminal domain; Iron only hydrogenase large subunit, C-... - 360.37 1.26E-118 294 - 572 superfamily 251611
Fe_hyd_SSU Iron hydrogenase small subunit; This family represents the small subunit of the Fe-only... cl03503 91.1785 4.30E-22 586 - 643 specific 251186
Fe_hyd_SSU superfamily Iron hydrogenase small subunit; This family represents the small subunit of the Fe-only... - 91.1785 4.30E-22 586 - 643 superfamily 261762
FeFe_hydrog_A [FeFe] hydrogenase, group A; This model describes iron-only hydrogenases of anaerobic and... - 454.855 1.01E-153 211 - 572 multi-dom 233903

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available Not available Not available Not available Cre09.g396600.t1.1 Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0005489 GO:0005506 GO:0006118 GO:0008901 GO:0008137 GO:0030024 -

GO:0005489

NA

Details: 
NA
GO Category: 
NA

GO:0005506

iron ion binding

Details: 
Interacting selectively and non-covalently with iron (Fe) ions.
GO Category: 
MF

GO:0006118

NA

Details: 
NA
GO Category: 
NA

GO:0008901

ferredoxin hydrogenase activity

Details: 
Catalysis of the reaction: 2 reduced ferredoxin + 2 H+ = 2 oxidized ferredoxin + H2.
GO Category: 
MF

GO:0008137

NADH dehydrogenase (ubiquinone) activity

Details: 
Catalysis of the reaction: NADH + H+ + ubiquinone = NAD+ + ubiquinol.
GO Category: 
MF

GO:0030024

NA

Details: 
NA
GO Category: 
NA

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