7978 Cation_efflux superfamily
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
7978 chr_9 Cation_efflux superfamily 410327 412481 - Cation_efflux superfamily

Synonyms

NCBI ID Ensembl Genomes exon ID
7449313 Thaps7978.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0449

Most Highly Correlated Transcripts

13448

Sec1
0.935

24947

zf-DHHC
0.9134

12899

AAA
0.9115

36372

S_TKc
0.9085

10487

hypothetical protein
0.9073

21947

GlcNAc superfamily
0.9055

21220

KU superfamily
0.9054

40200

TRX_reduct
0.9041

5066

hypothetical protein
0.9034

8129

hypothetical protein
0.9011

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Cation_efflux superfamily Cation efflux family; Members of this family are integral membrane proteins, that are found to... - 109.65 2.25E-26 376 - 680 superfamily 260348

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_13994 PHATRDRAFT_13994 138643 247016 239339 Cre06.g289150.t1.1 AT1G51610.1 351064

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0006812 GO:0008324 GO:0016020 -

GO:0006812

cation transport

Details: 
The directed movement of cations, atoms or small molecules with a net positive charge, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.
GO Category: 
BP

GO:0008324

cation transmembrane transporter activity

Details: 
Catalysis of the transfer of cation from one side of the membrane to the other.
GO Category: 
MF

GO:0016020

membrane

Details: 
Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins.
GO Category: 
CC

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