8199 LRR_RI superfamilyThalassiosira pseudonana | Diatom Portal

Genome Browser

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
8199	chr_9	LRR_RI superfamily	1074668	1076588	+	LRR_RI superfamily

Synonyms

NCBI ID	Ensembl Genomes exon ID
7450997	Thaps8199.1, Thaps8199.2

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0095

Most Highly Correlated Transcripts

3842 hypothetical protein 0.9023	10474 hypothetical protein 0.8974	4997 hypothetical protein 0.8971	4565 hypothetical protein 0.8951	262671 hypothetical protein 0.8936	10523 hypothetical protein 0.8934
20977 COG0398 0.8915	27813 Hid1 superfamily 0.8894	7444 hypothetical protein 0.8877	263035 HP_PGM_like 0.8873

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
LRR_RI superfamily		Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue...	-	80.4773	6.53E-17	210 - 423	superfamily	238064

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available		Not available	Not available	Not available	Not available	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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