832 UPF0160
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
832 chr_20 UPF0160 186651 187889 + UPF0160

Synonyms

NCBI ID Ensembl Genomes exon ID
7443334 Thaps832.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0290

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0016
 0.55

Most Highly Correlated Transcripts

12899

AAA
0.925

40200

TRX_reduct
0.8798

36007

Aldolase_II superfamily
0.8773

264556

FBPase
0.8756

13448

Sec1
0.8749

268443

SAICAR_synt_Sc
0.8704

37497

cysE
0.8678

16295

FBPase
0.8608

19158

GRX_PICOT_like
0.86

35136

NA
0.8541

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
UPF0160 Uncharacterized protein family (UPF0160); This family of proteins contains a large number of metal... cl01749 452.804 1.30E-158 68 - 406 specific 252102
UPF0160 superfamily Uncharacterized protein family (UPF0160); This family of proteins contains a large number of metal... - 452.804 1.30E-158 68 - 406 superfamily 261050

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_41745 PHATRDRAFT_41745 187737 325349 438498 Cre02.g118900.t1.2 AT5G41970.1 351392

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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