8439 NADB_Rossmann superfamily
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
8439 chr_10 NADB_Rossmann superfamily 595340 596558 - NADB_Rossmann superfamily

Synonyms

NCBI ID Ensembl Genomes exon ID
7445903 Thaps8439.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0321

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0258
 0.30

Most Highly Correlated Transcripts

11101

TauE
0.914

16372

Aldo_ket_red
0.9052

5119

MATE_like superfamily
0.8895

268835

(ECI1) ECH
0.887

3601

Ion_trans_2
0.8784

10096

hypothetical protein
0.8687

6232

hypothetical protein
0.8672

4066

hypothetical protein
0.8581

20661

hypothetical protein
0.8569

3487

(Tp_CCCH24) regulator [Rayko]
0.8561

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
NADB_Rossmann superfamily Rossmann-fold NAD(P)(+)-binding proteins; A large family of proteins that share a Rossmann-fold NAD... - 428.678 4.91E-149 64 - 386 superfamily 263925
WcaG Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate... - 235.992 4.45E-74 64 - 386 multi-dom 223528

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available Not available Not available 417589 Cre06.g278143.t1.1 AT2G45310.1 Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0003824 GO:0009225 GO:0005975 GO:0016857 -

GO:0003824

catalytic activity

Details: 
Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic.
GO Category: 
MF

GO:0009225

nucleotide-sugar metabolic process

Details: 
The cellular chemical reactions and pathways involving nucleotide-sugars, any nucleotide in which the distal phosphoric residue of a nucleoside 5'-diphosphate is in glycosidic linkage with a monosaccharide or monosaccharide derivative.
GO Category: 
BP

GO:0005975

carbohydrate metabolic process

Details: 
The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule.
GO Category: 
BP

GO:0016857

racemase and epimerase activity, acting on carbohydrates and derivatives

Details: 
Catalysis of a reaction that alters the configuration of one or more chiral centers in a carbohydrate molecule.
GO Category: 
MF

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