5119 MATE_like superfamily
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
5119 chr_5 MATE_like superfamily 405108 407604 + MATE_like superfamily

Synonyms

NCBI ID Ensembl Genomes exon ID
7449679 Thaps5119.2, Thaps5119.1, Thaps5119.4, Thaps5119.3, Thaps5119.5

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0321

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0258
 0.30

Most Highly Correlated Transcripts

11101

TauE
0.9418

2010

hypothetical protein
0.8918

8439

NADB_Rossmann superfamily
0.8895

7796

ANK
0.8765

16372

Aldo_ket_red
0.8651

6517

TLD superfamily
0.8328

4066

hypothetical protein
0.8295

3625

FNR_like superfamily
0.8288

9329

hypothetical protein
0.8263

11487

PhyH superfamily
0.8231

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
MATE_like superfamily Multidrug and toxic compound extrusion family and similar proteins; The integral membrane proteins... - 106.118 1.16E-24 188 - 596 superfamily 263758
NorM Na+-driven multidrug efflux pump [Defense mechanisms] - 106.155 1.25E-24 190 - 600 multi-dom 223608

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available Not available Not available Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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