8828 WD40 superfamily
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
8828 chr_11a WD40 superfamily 635028 636750 - WD40 superfamily

Synonyms

NCBI ID Ensembl Genomes exon ID
7444479 Thaps8828.2, Thaps8828.3, Thaps8828.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0120

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0002
 0.43

Most Highly Correlated Transcripts

3708

hypothetical protein
0.8419

25094

PseudoU_synth_RluCD_like
0.8364

23258

hypothetical protein
0.8246

20925

hypothetical protein
0.8245

1985

hypothetical protein
0.8237

35390

(KAR3) NADB_Rossmann superfamily
0.8214

25852

Peptidase_A22B superfamily
0.8164

5820

hypothetical protein
0.8159

8706

UgpQ
0.8159

6086

hypothetical protein
0.8157

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
WD40 superfamily WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions... - 70.8268 5.96E-14 10 - 405 superfamily 238121

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_47276 PHATRDRAFT_47276 199303 254647 120285 Not available Not available 319165

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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