8903 DUF563Thalassiosira pseudonana | Diatom Portal

Genome Browser

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
8903	chr_11b	DUF563	30177	31694	+	DUF563

Synonyms

NCBI ID	Ensembl Genomes exon ID
7445445	Thaps8903.1

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0012

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Thaps_bicluster_0283	0.35	15 620

Most Highly Correlated Transcripts

36669 TPT 0.9016	38608 SDR_a5 0.8902	268343 NA 0.8595	36235 p450 superfamily 0.8589	261608 PLN02585 0.8564	268592 VDE superfamily 0.8551
574 PRK05444 0.845	11698 hypothetical protein 0.845	261882 Thioredoxin_like superfamily 0.8391	36078 PRX5_like 0.8383

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
DUF563		Protein of unknown function (DUF563); Family of uncharacterized proteins.	cl15705	80.1514	2.09E-17	366 - 463	specific	252682
DUF563 superfamily		Protein of unknown function (DUF563); Family of uncharacterized proteins.	-	80.1514	2.09E-17	366 - 463	superfamily	265766

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available		Not available	238496	Not available	Not available	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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