9691 LRR_RI superfamilyThalassiosira pseudonana | Diatom Portal

Genome Browser

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
9691	chr_14	LRR_RI superfamily	115908	116909	+	LRR_RI superfamily

Synonyms

NCBI ID	Ensembl Genomes exon ID
7451628	Thaps9691.1

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0150

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Thaps_bicluster_0033	0.48	0.000000021 0.013

Most Highly Correlated Transcripts

4108 hypothetical protein 0.9919	6991 hypothetical protein 0.8876	6133 UBCc 0.8703	5942 MinD 0.8701	3348 hypothetical protein 0.8694	11848 hypothetical protein 0.8671
5074 hypothetical protein 0.8666	261492 HAM1 0.8659	261490 HemK 0.8653	35810 TER_DECR_SDR_a 0.8648

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
LRR_RI superfamily		Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue...	-	80.8625	9.36E-18	77 - 245	superfamily	238064

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available		Not available	Not available	Not available	Not available	Not available	Not available	250329

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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