1326 sopT
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
1326 chr_1 sopT 1227840 1229355 - sopT

Synonyms

NCBI ID Ensembl Genomes exon ID
7445300 Thaps1326.2, Thaps1326.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0048

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0156
 0.33

Most Highly Correlated Transcripts

bd1380

(bd1380) ycf39
0.9256

bd208

(bd208) DUF3529
0.9195

33008

PLN02338
0.9143

bd1403

(bd1403) NA
0.913

bd1160

(bd1160) Chloroa_b-bind superfamily
0.9057

bd1863

(bd1863) NA
0.9014

6524

phytoene_desat
0.9

bd1652

(bd1652) ABC_ATPase superfamily
0.8982

bd258

(bd258) HU
0.8943

bd1820

(bd1820) Fasciclin
0.8943

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
ATPS ATP-sulfurylase; ATP-sulfurylase (ATPS), also known as sulfate adenylate transferase, catalyzes the... cl00015 415.108 2.37E-143 59 - 407 specific 173895
nt_trans superfamily nucleotidyl transferase superfamily; nt_trans (nucleotidyl transferase) This superfamily includes... - 415.108 2.37E-143 59 - 407 superfamily 260139
sopT ATP sulphurylase; This enzyme forms adenosine 5'-phosphosulfate (APS) from ATP and free... - 448.383 6.76E-156 34 - 407 multi-dom 232928

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_42282 PHATRDRAFT_42282 270978 327005 459734 Cre02.g107450.t1.2 Not available Not available

KEGG

KEGG description KEGG Pathway
Metabolic pathways map01100

GO Terms

GO:0000103 GO:0004781 GO:0009336 -

GO:0000103

sulfate assimilation

Details: 
The pathways by which inorganic sulfate is processed and incorporated into sulfated compounds.
GO Category: 
BP

GO:0004781

sulfate adenylyltransferase (ATP) activity

Details: 
Catalysis of the reaction: ATP + sulfate = diphosphate + adenylylsulfate.
GO Category: 
MF

GO:0009336

sulfate adenylyltransferase complex (ATP)

Details: 
An enzyme complex that catalyzes the formation adenylylsulfate from sulfate and ATP.
GO Category: 
CC

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