bd1313 (bd1313) psbHThalassiosira pseudonana | Diatom Portal

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Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
bd1313	bd_26x41	(bd1313) psbH	45589	45789	-	psbH

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0029

Most Highly Correlated Transcripts

ThpsCp021 (psbH) photosystem II protein H 1	ThpsCp019 (psbT) photosystem II protein T 0.9931	ThpsCp001 (psaA) photosystem I P700 chlorophyll a apoprotein A1 0.9745	bd2073 (bd2073) psbB 0.9722	ThpsCp018 (psbB) photosystem II 47 kDa protein 0.9722	ThpsCp053 (psbD) photosystem II protein D2 0.9674
bd1387 (bd1387) psbE 0.9667	ThpsCp065 (psbE) photosystem II protein V 0.9667	bd1304 (bd1304) Ycf4 0.9663	ThpsCp066 (ycf4) photosystem I assembly protein Ycf4 0.9663

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
psbH		photosystem II reaction center protein H; Provisional	cl02951	86.6931	4.43E-24	1 - 64	specific	179451
PsbH superfamily		Photosystem II 10 kDa phosphoprotein; This protein is phosphorylated in a light dependent reaction.	-	86.6931	4.43E-24	1 - 64	superfamily	194490

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available		Not available	Not available	210814	Not available	Not available	ATCG00710.1	Not available

KEGG

KEGG description	KEGG Pathway
Metabolic pathways	map01100

GO Terms

Not available -

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