bd1342 (bd1342) psaL
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
bd1342 bd_26x41 (bd1342) psaL 3322 3768 - psaL

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0058

Most Highly Correlated Transcripts

ThpsCp068

(psaL) photosystem I subunit XI
1

ThpsCp063

(psbL) photosystem II protein L
0.9915

ThpsCp064

(psbF) photosystem II protein VI
0.989

ThpsCp051

(psbK) photosystem II protein K
0.9862

ThpsCp062

(psbJ) photosystem II protein J
0.9854

31128

(lhcx5) Chloroa_b-bind
0.9826

22747

(Lhcr10) fucoxanthin chlorophyll a/c light-harvesting protein
0.9812

bd1350

(bd1350) psaF
0.9802

bd1403

(bd1403) NA
0.9797

ThpsCp071

(ycf41) hypothetical protein
0.9797

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
psaL photosystem I subunit XI; Validated cl03651 234.938 7.57E-80 1 - 143 specific 177043
PsaL superfamily Photosystem I reaction centre subunit XI; This family consists of the photosystem I reaction centre... - 234.938 7.57E-80 1 - 143 superfamily 243486

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available Not available Not available Not available Cre12.g486300.t1.2 AT4G12800.1 Not available

KEGG

KEGG description KEGG Pathway
Metabolic pathways map01100

GO Terms

Not available -

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