bd1350 (bd1350) psaF
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
bd1350 bd_26x41 (bd1350) psaF 1 507 - psaF

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0058

Most Highly Correlated Transcripts

ThpsCp073

(psaF) photosystem I subunit III
0.9992

ThpsCp062

(psbJ) photosystem II protein J
0.985

bd1342

(bd1342) psaL
0.9802

ThpsCp068

(psaL) photosystem I subunit XI
0.9802

ThpsCp064

(psbF) photosystem II protein VI
0.9759

ThpsCp063

(psbL) photosystem II protein L
0.9747

ThpsCp051

(psbK) photosystem II protein K
0.9693

22747

(Lhcr10) fucoxanthin chlorophyll a/c light-harvesting protein
0.9683

bd1441

(bd1441) ccsA
0.9653

ThpsCp088

(ccsA) cytochrome c biogenesis protein
0.9653

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
psaF photosystem I subunit III; Validated cl03627 342.409 3.94E-121 1 - 169 specific 177054
PSI_PsaF superfamily Photosystem I reaction centre subunit III; Photosystem I (PSI) is an integral membrane protein... - 342.409 3.94E-121 1 - 169 superfamily 243476

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available Not available Not available Not available Cre09.g412100.t1.2 AT1G31330.1 Not available

KEGG

KEGG description KEGG Pathway
Metabolic pathways map01100

GO Terms

Not available -

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