bd1464 (bd1464) CAP_ED
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
bd1464 bd_33x54 (bd1464) CAP_ED 31517 32290 - CAP_ED

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0050

Most Highly Correlated Transcripts

36223

CAP_ED
0.9309

268368

(Tp_HSF_3.6a) HSF_DNA-bind superfamily
0.9071

24201

hypothetical protein
0.9055

5410

hypothetical protein
0.8941

20404

hypothetical protein
0.8769

263492

pathogenesis-related transcription factor
0.8728

263495

PRK11824
0.8721

693

(MHMT1) metH
0.8622

bd731

(bd731) NA
0.8616

264902

(cht1) chitinase
0.8605

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
CAP_ED effector domain of the CAP family of transcription factors; members include CAP (or cAMP receptor... cl00047 86.2257 2.62E-21 29 - 131 specific 237999
CAP_ED superfamily effector domain of the CAP family of transcription factors; members include CAP (or cAMP receptor... - 86.2257 2.62E-21 29 - 131 superfamily 260155
CAP_ED effector domain of the CAP family of transcription factors; members include CAP (or cAMP receptor... cl00047 86.2257 2.62E-21 29 - 131 specific 237999
CAP_ED superfamily effector domain of the CAP family of transcription factors; members include CAP (or cAMP receptor... - 86.2257 2.62E-21 29 - 131 superfamily 260155
Crp cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein... - 64.4675 5.55E-13 23 - 131 multi-dom 223736
Crp cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein... - 64.4675 5.55E-13 23 - 131 multi-dom 223736

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available Not available Not available Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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