263492 pathogenesis-related transcription factor
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
263492 chr_9 pathogenesis-related transcription factor 196243 197424 - pathogenesis-related transcription factor

Synonyms

NCBI ID Ensembl Genomes exon ID
7449274 Thaps263492.1, Thaps263492.2

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0247

Most Highly Correlated Transcripts

bd894

(bd894) Peptidase_M14_like superfamily
0.8905

262616

(MYB22)
0.8877

bd1465

(bd1465) PKc_like superfamily
0.8831

3655

Lipase_3
0.8743

bd1464

(bd1464) CAP_ED
0.8728

11628

hypothetical protein
0.8673

263599

COG3899
0.867

263610

COG3899
0.8624

bd1866

(bd1866) NA
0.8621

8762

SNF2_N
0.8606

Conserved Domains

Not available

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available Not available Not available Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0003700 GO:0005634 GO:0006355 -

GO:0003700

sequence-specific DNA binding transcription factor activity

Details: 
Interacting selectively and non-covalently with a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex.
GO Category: 
MF

GO:0005634

nucleus

Details: 
A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.
GO Category: 
CC

GO:0006355

regulation of transcription, DNA-templated

Details: 
Any process that modulates the frequency, rate or extent of cellular DNA-templated transcription.
GO Category: 
BP

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