13444 MTHFR
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
13444 chr_1 MTHFR 2316251 2318465 + MTHFR

Synonyms

NCBI ID Ensembl Genomes exon ID
7449039 Thaps13444.3, Thaps13444.2, Thaps13444.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0188

Most Highly Correlated Transcripts

4108

hypothetical protein
0.9769

268338

(FAO1) fadB
0.9088

8500

PRP38 superfamily
0.9037

26212

(COP2) COG5096
0.9017

21223

hypothetical protein
0.9014

21947

GlcNAc superfamily
0.8995

261640

MFS
0.8991

261400

NA
0.8962

25377

Ion_trans
0.8957

23169

hypothetical protein
0.8956

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
MTHFR Methylenetetrahydrofolate reductase (MTHFR). 5,10-Methylenetetrahydrofolate is reduced to 5-... cl00246 326.11 2.00E-106 62 - 344 specific 238299
MTHFR superfamily Methylenetetrahydrofolate reductase (MTHFR). 5,10-Methylenetetrahydrofolate is reduced to 5-... - 326.11 2.00E-106 62 - 344 superfamily 260296

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_28431 PHATRDRAFT_28431 Not available Not available Not available Cre10.g433600.t1.2 AT2G44160.1 541479

KEGG

KEGG description KEGG Pathway
Metabolic pathways map01100

GO Terms

GO:0004489 GO:0006555 -

GO:0004489

methylenetetrahydrofolate reductase (NAD(P)H) activity

Details: 
Catalysis of the reaction: 5-methyltetrahydrofolate + NAD(P)+ = 5,10-methylenetetrahydrofolate + NAD(P)H + H+.
GO Category: 
MF

GO:0006555

methionine metabolic process

Details: 
The chemical reactions and pathways involving methionine (2-amino-4-(methylthio)butanoic acid), a sulfur-containing, essential amino acid found in peptide linkage in proteins.
GO Category: 
BP

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