bd1823 (bd1823) SCP superfamilyThalassiosira pseudonana | Diatom Portal

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Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
bd1823	bd_13x1	(bd1823) SCP superfamily	41477	42564	-	SCP superfamily

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0004

Most Highly Correlated Transcripts

23071 hypothetical protein 0.945	33497 MEMO_like 0.9308	26041 hypothetical protein 0.9186	11503 hypothetical protein 0.9067	19649 hypothetical protein 0.9049	7186 hypothetical protein 0.9035
25136 Solute_trans_a superfamily 0.8956	2070 hypothetical protein 0.8935	4017 hypothetical protein 0.8932	661 Cob-chelat-sub 0.8927

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
SCP superfamily		SCP: SCP-like extracellular protein domain, found in eukaryotes and prokaryotes. This family...	-	62.9979	5.01E-13	80 - 210	superfamily	260208

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available		Not available	Not available	Not available	Not available	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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