33497 MEMO_like
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
33497 chr_4 MEMO_like 526548 527691 + MEMO_like

Synonyms

NCBI ID Ensembl Genomes exon ID
7452597 Thaps33497.1, Thaps33497.3, Thaps33497.2

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0355

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0073
 0.47

Most Highly Correlated Transcripts

bd1823

(bd1823) SCP superfamily
0.9308

1791

hypothetical protein
0.8794

6873

PRK05463
0.876

42646

PRK04342
0.8707

bd1840

(bd1840) NA
0.8705

20714

PDI_a_family
0.8619

3590

Ion_trans_2
0.8614

24353

hypothetical protein
0.8597

8510

hypothetical protein
0.8572

263178

(HCD1) NADB_Rossmann superfamily
0.8563

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
MEMO_like Memo (mediator of ErbB2-driven cell motility) is co-precipitated with the C terminus of ErbB2, a... cl00599 305.27 7.55E-103 23 - 322 specific 153373
Extradiol_Dioxygenase_3B_like superfamily Subunit B of Class III Extradiol ring-cleavage dioxygenases; Dioxygenases catalyze the... - 305.27 7.55E-103 23 - 322 superfamily 260521

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_46220 PHATRDRAFT_46220 273389 204124 217382 Cre02.g096200.t1.2 AT2G25280.1 351598

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

Add comment

Log in to post comments