13922 2A0303
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
13922 chr_1 2A0303 836679 838541 - 2A0303

Synonyms

NCBI ID Ensembl Genomes exon ID
7442872 Thaps13922.2, Thaps13922.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0028

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0287
 0.36

Most Highly Correlated Transcripts

bd1869

(bd1869) SET
0.9196

8793

DUF328
0.9022

31829

CBS_like
0.9021

268592

VDE superfamily
0.8982

6594

hypothetical protein
0.8953

36669

TPT
0.8944

968

RimI
0.894

7191

Aldo_ket_red
0.8917

1219

PAP_fibrillin superfamily
0.8885

19662

hypothetical protein
0.8848

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
2A0303 cationic amino acid transport permease; [Transport and binding proteins, Amino acids, peptides and... - 282.474 1.04E-86 84 - 566 multi-dom 129984

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
19662 PHATRDRAFT_15324 PHATRDRAFT_15324 Not available 328140 Not available Not available AT3G03720.2 553776

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0005279 GO:0006865 GO:0016020 GO:0006810 -

GO:0005279

NA

Details: 
NA
GO Category: 
NA

GO:0006865

amino acid transport

Details: 
The directed movement of amino acids, organic acids containing one or more amino substituents, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.
GO Category: 
BP

GO:0016020

membrane

Details: 
Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins.
GO Category: 
CC

GO:0006810

transport

Details: 
The directed movement of substances (such as macromolecules, small molecules, ions) into, out of or within a cell, or between cells, or within a multicellular organism by means of some agent such as a transporter or pore.
GO Category: 
BP

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