1219 PAP_fibrillin superfamily
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
1219 chr_1 PAP_fibrillin superfamily 956928 958045 - PAP_fibrillin superfamily

Synonyms

NCBI ID Ensembl Genomes exon ID
7445269 Thaps1219.2, Thaps1219.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0028

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0118
 0.28

Most Highly Correlated Transcripts

31829

CBS_like
0.9597

26991

GRX_GRXh_1_2_like
0.9391

36669

TPT
0.9349

268908

Trans_IPPS_HH
0.932

18469

FkpA
0.9319

17214

PLN02512
0.9281

268592

VDE superfamily
0.9264

38608

SDR_a5
0.9257

4331

Aldolase_Class_I superfamily
0.9244

4876

hypothetical protein
0.9227

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
PAP_fibrillin superfamily PAP_fibrillin; This family identifies a conserved region found in a number of plastid lipid-... - 66.7558 1.96E-13 116 - 331 superfamily 252780

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_32261 PHATRDRAFT_32261 225795 296093 Not available Cre03.g197650.t1.2 Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

Add comment

Log in to post comments