1394 (ADH1) Zn_ADH6
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
1394 chr_1 (ADH1) Zn_ADH6 1397019 1398231 - Zn_ADH6

Synonyms

NCBI ID Ensembl Genomes exon ID
7449127 Thaps1394.2, Thaps1394.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0171

Most Highly Correlated Transcripts

33348

IGPD superfamily
0.9265

11848

hypothetical protein
0.9235

260846

steroid binding protein 1
0.919

30701

PRK05279
0.9149

261490

HemK
0.9139

36419

RabGAP-TBC
0.9132

25040

NA
0.9114

37642

nascent-polypeptide-associated complex alpha polypeptide-like protein
0.9108

5074

hypothetical protein
0.9105

32216

(RT5) rpsE_bact
0.9103

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Zn_ADH6 Alcohol dehydrogenases of the MDR family; NAD(P)(H)-dependent oxidoreductases are the major enzymes... cl16912 481.331 1.05E-169 1 - 374 specific 176221
MDR superfamily Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family; The... - 481.331 1.05E-169 1 - 374 superfamily 266485
AdhP Zn-dependent alcohol dehydrogenases [General function prediction only] - 254.049 6.08E-81 1 - 373 multi-dom 223992

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_12757 PHATRDRAFT_12757 256564 185204 Not available Not available AT5G63620.1 Not available

KEGG

KEGG description KEGG Pathway
Biosynthesis of secondary metabolites map01110

GO Terms

GO:0008270 GO:0016491 GO:0004022 GO:0004023 GO:0004024 GO:0004025 -

GO:0008270

zinc ion binding

Details: 
Interacting selectively and non-covalently with zinc (Zn) ions.
GO Category: 
MF

GO:0016491

oxidoreductase activity

Details: 
Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced.
GO Category: 
MF

GO:0004022

alcohol dehydrogenase (NAD) activity

Details: 
Catalysis of the reaction: an alcohol + NAD+ = an aldehyde or ketone + NADH + H+.
GO Category: 
MF

GO:0004023

alcohol dehydrogenase activity, metal ion-independent

Details: 
Catalysis of the reaction: an alcohol + NAD+ = an aldehyde or ketone + NADH + H+; can proceed in the absence of a metal ion.
GO Category: 
MF

GO:0004024

alcohol dehydrogenase activity, zinc-dependent

Details: 
Catalysis of the reaction: an alcohol + NAD+ = an aldehyde or ketone + NADH + H+, requiring the presence of zinc.
GO Category: 
MF

GO:0004025

alcohol dehydrogenase activity, iron-dependent

Details: 
Catalysis of the reaction: an alcohol + NAD+ = an aldehyde or ketone + NADH + H+, requiring the presence of iron.
GO Category: 
MF

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