1422 Cnd3Thalassiosira pseudonana | Diatom Portal

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Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
1422	chr_1	Cnd3	1465344	1468620	+	Cnd3

Synonyms

NCBI ID	Ensembl Genomes exon ID
7449137	Thaps1422.2, Thaps1422.1

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0082

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Thaps_bicluster_0143	0.26	750 840

Most Highly Correlated Transcripts

bd1173 (bd1173) S_TKc 0.954	262102 KISc 0.9524	bd950 (bd950) NA 0.948	4808 hypothetical protein 0.9472	bd1983 (bd1983) RecA-like_NTPases superfamily 0.9425	42365 Smc 0.9425
7586 MAP65_ASE1 0.9398	bd1081 (bd1081) NA 0.9393	4688 hypothetical protein 0.9381	bd1214 (bd1214) KISc_C_terminal 0.937

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
Cnd3		Nuclear condensing complex subunits, C-term domain; The Cnd1-3 proteins are the three non-SMC (...	-	204.811	9.59E-59	600 - 916	multi-dom	257246

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available	PHATRDRAFT_48922	PHATRDRAFT_48922	204558	260684	Not available	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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