14384 cyclophilin superfamily
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
14384 chr_6 cyclophilin superfamily 1775929 1777701 + cyclophilin superfamily

Synonyms

NCBI ID Ensembl Genomes exon ID
7444598 Thaps14384.2, Thaps14384.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0432

Most Highly Correlated Transcripts

25147

hypothetical protein
0.9041

13448

Sec1
0.8978

8084

hypothetical protein
0.8935

12899

AAA
0.8816

4105

PKc_like superfamily
0.8683

3287

hypothetical protein
0.8682

22822

NTF2
0.8666

5824

hypothetical protein
0.8664

17095

NIF
0.8638

1819

hypothetical protein
0.8635

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
cyclophilin superfamily cyclophilin: cyclophilin-type peptidylprolyl cis- trans isomerases. This family contains eukaryotic... - 232.306 4.40E-73 287 - 449 superfamily 260252

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_27375 PHATRDRAFT_27375 178000 288602 451960 Cre10.g457000.t1.1 AT5G67530.1 521528

KEGG

KEGG description KEGG Pathway
Ubiquitin mediated proteolysis map04120

GO Terms

GO:0006457 GO:0003755 GO:0004600 GO:0030051 GO:0042027 -

GO:0006457

protein folding

Details: 
The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure.
GO Category: 
BP

GO:0003755

peptidyl-prolyl cis-trans isomerase activity

Details: 
Catalysis of the reaction: peptidyl-proline (omega=180) = peptidyl-proline (omega=0).
GO Category: 
MF

GO:0004600

NA

Details: 
NA
GO Category: 
NA

GO:0030051

NA

Details: 
NA
GO Category: 
NA

GO:0042027

NA

Details: 
NA
GO Category: 
NA

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