14637 GH43_6
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
14637 chr_13 GH43_6 855968 857344 + GH43_6

Synonyms

NCBI ID Ensembl Genomes exon ID
7447875 Thaps14637.1, Thaps14637.2

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0297

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0003
 0.47

Most Highly Correlated Transcripts

bd1857

(bd1857) DnaJ
0.8906

bd890

(bd890) NA
0.8814

bd843

(bd843) NA
0.8539

bd1306

(bd1306) NA
0.8515

bd1403

(bd1403) NA
0.846

bd1652

(bd1652) ABC_ATPase superfamily
0.8454

bd211

(bd211) Maf_Ham1 superfamily
0.8442

bd687

(bd687) NA
0.8436

bd1160

(bd1160) Chloroa_b-bind superfamily
0.8415

bd1820

(bd1820) Fasciclin
0.8373

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
GH43_6 Glycosyl hydrolase family 43; This glycosyl hydrolase family 43 (GH43) includes enzymes with beta-1... cl14647 352.329 1.45E-119 123 - 419 specific 185726
GH43_62_32_68 superfamily Glycosyl hydrolase families: GH43, GH62, GH32, GH68; Members of the glycosyl hydrolase families 32... - 352.329 1.45E-119 123 - 419 superfamily 265439

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available Not available Not available 245302 Not available AT3G49880.1 Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

Add comment

Log in to post comments