14979 PLN02452
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
14979 chr_2 PLN02452 2571521 2572957 - PLN02452

Synonyms

NCBI ID Ensembl Genomes exon ID
7452128 Thaps14979.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0309

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0034
 0.54

Most Highly Correlated Transcripts

bd1813

(bd1813) NA
0.8123

bd738

(bd738) NA
0.8089

bd1801

(bd1801) NA
0.8014

bd739

(bd739) NA
0.798

bd1802

(bd1802) NA
0.7956

bd1788

(bd1788) NA
0.7812

bd740

(bd740) NA
0.7789

bd1748

(bd1748) NA
0.7676

bd1749

(bd1749) NA
0.7624

24626

RING
0.7291

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
PLN02452 phosphoserine transaminase cl18945 567.013 0 50 - 424 specific 178071
AAT_I superfamily Aspartate aminotransferase (AAT) superfamily (fold type I) of pyridoxal phosphate (PLP)-dependent... - 567.013 0 50 - 424 superfamily 267298

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available 194145 Not available 114260 Cre07.g331550.t1.2 AT4G35630.1 Not available

KEGG

KEGG description KEGG Pathway
Metabolic pathways map01100

GO Terms

GO:0008152 GO:0008483 GO:0006564 GO:0004648 -

GO:0008152

metabolic process

Details: 
The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation.
GO Category: 
BP

GO:0008483

transaminase activity

Details: 
Catalysis of the transfer of an amino group to an acceptor, usually a 2-oxo acid.
GO Category: 
MF

GO:0006564

L-serine biosynthetic process

Details: 
The chemical reactions and pathways resulting in the formation of L-serine, the L-enantiomer of serine, i.e. (2S)-2-amino-3-hydroxypropanoic acid.
GO Category: 
BP

GO:0004648

O-phospho-L-serine:2-oxoglutarate aminotransferase activity

Details: 
Catalysis of the reaction: O-phospho-L-serine + 2-oxoglutarate = 3-phosphonooxypyruvate + L-glutamate.
GO Category: 
MF

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