15610 KISc
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
15610 chr_8 KISc 413526 417595 - KISc

Synonyms

NCBI ID Ensembl Genomes exon ID
7445571 Thaps15610.3, Thaps15610.1, Thaps15610.2

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0091

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0039
 0.52

Most Highly Correlated Transcripts

bd1173

(bd1173) S_TKc
0.9788

bd1081

(bd1081) NA
0.9742

bd1983

(bd1983) RecA-like_NTPases superfamily
0.9621

bd1214

(bd1214) KISc_C_terminal
0.961

bd950

(bd950) NA
0.9589

bd765

(bd765) NA
0.9372

bd439

(bd439) POLBc_alpha
0.9303

bd843

(bd843) NA
0.915

14707

Motor_domain superfamily
0.9111

bd846

(bd846) NA
0.9051

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
KISc Kinesin motor domain. This catalytic (head) domain has ATPase activity and belongs to the larger... cl00286 381.969 1.01E-121 14 - 404 specific 238054
Motor_domain superfamily Myosin and Kinesin motor domain. These ATPases belong to the P-loop NTPase family and provide the... - 381.969 1.01E-121 14 - 404 superfamily 260327
KIP1 Kinesin-like protein [Cytoskeleton] - 254.663 4.99E-73 102 - 584 multi-dom 227392

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available Not available Not available Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0003777 GO:0005524 GO:0005875 GO:0007018 -

GO:0003777

microtubule motor activity

Details: 
Catalysis of movement along a microtubule, coupled to the hydrolysis of a nucleoside triphosphate (usually ATP).
GO Category: 
MF

GO:0005524

ATP binding

Details: 
Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
GO Category: 
MF

GO:0005875

microtubule associated complex

Details: 
Any multimeric complex connected to a microtubule.
GO Category: 
CC

GO:0007018

microtubule-based movement

Details: 
A microtubule-based process that is mediated by motor proteins and results in the movement of organelles, other microtubules, or other particles along microtubules.
GO Category: 
BP

Add comment

Log in to post comments