1584 cyclophilin
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
1584 chr_1 cyclophilin 1895432 1896650 + cyclophilin

Synonyms

NCBI ID Ensembl Genomes exon ID
7446814 Thaps1584.1, Thaps1584.5, Thaps1584.3, Thaps1584.4, Thaps1584.2

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0070

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0288
 0.28

Most Highly Correlated Transcripts

bd1645

(bd1645) tpt
0.9354

6759

hypothetical protein
0.9225

36235

p450 superfamily
0.9208

bd760

(bd760) ZnMc superfamily
0.9156

261226

thylakoid lumenal 17.4 kDa protein, chloroplast precursor
0.9064

bd298

(bd298) ABM superfamily
0.8974

24484

hypothetical protein
0.8967

26131

PRK13474
0.8957

38306

Chloroa_b-bind
0.8949

32321

TRX_family
0.8925

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
cyclophilin cyclophilin: cyclophilin-type peptidylprolyl cis- trans isomerases. This family contains eukaryotic... cl00197 90.0156 2.88E-22 98 - 217 specific 238194
cyclophilin superfamily cyclophilin: cyclophilin-type peptidylprolyl cis- trans isomerases. This family contains eukaryotic... - 90.0156 2.88E-22 98 - 217 superfamily 260252

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_14696 PHATRDRAFT_14696 226832 318967 46318 Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0006457 -

GO:0006457

protein folding

Details: 
The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure.
GO Category: 
BP

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