1643 LPLAT superfamilyThalassiosira pseudonana | Diatom Portal

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Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
1643	chr_1	LPLAT superfamily	2064499	2065873	-	LPLAT superfamily

Synonyms

NCBI ID	Ensembl Genomes exon ID
7449794	Thaps1643.1

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0334

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Thaps_bicluster_0050	0.45

Most Highly Correlated Transcripts

bd895 (bd895) NA 0.786	21090 hypothetical protein 0.7807	1836 hypothetical protein 0.7727	bd409 (bd409) Snf7 superfamily 0.7713	bd877 (bd877) NA 0.7693	269997 COG1112 0.7597
25237 hypothetical protein 0.7542	262186 KISc 0.7542	24437 hypothetical protein 0.7532	8228 Reprolysin_3 0.753

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
LPLAT superfamily		Lysophospholipid acyltransferases (LPLATs) of glycerophospholipid biosynthesis; Lysophospholipid...	-	82.6715	1.80E-18	105 - 266	superfamily	266537

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available		Not available	Not available	Not available	Not available	Not available	AT3G18850.5	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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