16613 S_TKc
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
16613 chr_1 S_TKc 2420281 2424888 + S_TKc

Synonyms

NCBI ID Ensembl Genomes exon ID
7449057 Thaps16613.1, Thaps16613.2, Thaps16613.3

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0128

Most Highly Correlated Transcripts

20865

DUF1162 superfamily
0.9405

261448

PLN02205
0.9327

1057

PIH1 superfamily
0.9292

36372

S_TKc
0.9242

25288

Sec6 superfamily
0.9195

23573

hypothetical protein
0.9176

268232

COG3899
0.916

21268

zf-CXXC
0.9158

24828

CAP_GLY
0.9141

262371

AAA_12 superfamily
0.9124

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
PKc Catalytic domain of Protein Kinases; Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the... cl09925 194.378 1.01E-55 930 - 1226 specific 173623
PKc_like superfamily Protein Kinases, catalytic domain; The protein kinase superfamily is mainly composed of the... - 194.378 1.01E-55 930 - 1226 superfamily 263920
Luminal_IRE1_like superfamily The Luminal domain, a dimerization domain, of Inositol-requiring protein 1-like proteins; The... - 74.4503 2.29E-14 330 - 472 superfamily 189332
S_TKc Serine/Threonine protein kinases, catalytic domain; Phosphotransferases. Serine or threonine-... - 217.012 3.15E-63 924 - 1225 multi-dom 214567

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_44445 PHATRDRAFT_44445 188530 263806 Not available Not available AT3G59410.1 Not available

KEGG

KEGG description KEGG Pathway
Protein processing in endoplasmic reticulum map04141

GO Terms

GO:0004672 GO:0005524 GO:0006468 GO:0004713 GO:0004674 -

GO:0004672

protein kinase activity

Details: 
Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP.
GO Category: 
MF

GO:0005524

ATP binding

Details: 
Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
GO Category: 
MF

GO:0006468

protein phosphorylation

Details: 
The process of introducing a phosphate group on to a protein.
GO Category: 
BP

GO:0004713

protein tyrosine kinase activity

Details: 
Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate.
GO Category: 
MF

GO:0004674

protein serine/threonine kinase activity

Details: 
Catalysis of the reactions: ATP + protein serine = ADP + protein serine phosphate, and ATP + protein threonine = ADP + protein threonine phosphate.
GO Category: 
MF

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