25288 Sec6 superfamily
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
25288 chr_17 Sec6 superfamily 458382 463046 - Sec6 superfamily

Synonyms

NCBI ID Ensembl Genomes exon ID
7442136 Thaps25288.2, Thaps25288.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0397

Most Highly Correlated Transcripts

36372

S_TKc
0.9443

22138

Sec3_C superfamily
0.9416

20865

DUF1162 superfamily
0.9298

268232

COG3899
0.929

24828

CAP_GLY
0.928

8535

hypothetical protein
0.9259

5760

SART-1
0.9253

268606

TBCC
0.9234

10815

Peptidase_S41_TRI
0.9225

21220

KU superfamily
0.9216

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Sec6 superfamily Exocyst complex component Sec6; Sec6 is a component of the multiprotein exocyst complex. Sec6... - 98.5615 2.98E-21 867 - 1360 superfamily 268238

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_42505 PHATRDRAFT_42505 270527 257993 Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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