16675 TatD_DNAse
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
16675 chr_7 TatD_DNAse 1795387 1796688 - TatD_DNAse

Synonyms

NCBI ID Ensembl Genomes exon ID
7450599 Thaps16675.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0215

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0042
 0.43

Most Highly Correlated Transcripts

33353

TRX_family
0.9249

6693

hypothetical protein
0.9208

30701

PRK05279
0.9121

4302

DUF788 superfamily
0.906

38331

YIP1 superfamily
0.9025

25068

hypothetical protein
0.9015

4292

hypothetical protein
0.8995

10893

hypothetical protein
0.8991

8129

hypothetical protein
0.8969

260866

(ORC2) ORC2 superfamily
0.8969

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
TatD_DNAse TatD like proteins; E.coli TatD is a cytoplasmic protein, shown to have magnesium dependent DNase... cl00281 216.671 3.90E-67 102 - 428 specific 238635
metallo-dependent_hydrolases superfamily Superfamily of metallo-dependent hydrolases (also called amidohydrolase superfamily) is a large... - 216.671 3.90E-67 102 - 428 superfamily 260323

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_bd392 PHATRDRAFT_bd392 224602 158001 456738 Cre02.g085650.t1.1 AT3G52390.1 350745

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0016888 -

GO:0016888

endodeoxyribonuclease activity, producing 5'-phosphomonoesters

Details: 
Catalysis of the hydrolysis of ester linkages within deoxyribonucleic acids by creating internal breaks to yield 5'-phosphomonoesters.
GO Category: 
MF

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