17110 rbgA
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
17110 chr_1 rbgA 2086327 2088180 - rbgA

Synonyms

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0221

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0270
 0.28

Most Highly Correlated Transcripts

34027

SrmB
0.9201

bd1709

(bd1709) NA
0.9187

bd1667

(bd1667) Mpp10
0.9175

39953

SrmB
0.9104

bd1876

(bd1876) NatB_MDM20 superfamily
0.9093

bd96

(bd96) eIF-3_zeta
0.9083

bd190

(bd190) SrmB
0.9073

14597

SrmB
0.9056

34006

Sun
0.9046

23900

hypothetical protein
0.9045

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
YlqF Circularly permuted YlqF GTPase; Proteins of the YlqF family contain all sequence motifs typical of... cl17249 232.419 1.26E-73 118 - 295 specific 206749
YlqF_related_GTPase superfamily Circularly permuted YlqF-related GTPases; These proteins are found in bacteria, eukaryotes, and... - 232.419 1.26E-73 118 - 295 superfamily 247803
rbgA GTPase YlqF; Reviewed - 305.942 2.01E-100 114 - 407 multi-dom 236570

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available 214794 262113 75715 Cre17.g747347.t1.1 AT4G02790.1 297549

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0005525 -

GO:0005525

GTP binding

Details: 
Interacting selectively and non-covalently with GTP, guanosine triphosphate.
GO Category: 
MF

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