bd190 (bd190) SrmB
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
bd190 bd_35x67 (bd190) SrmB 2 649 + SrmB

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0271

Most Highly Correlated Transcripts

33252

SrmB
0.9761

21173

hypothetical protein
0.9617

269080

PLN02327
0.9581

268238

PRK05192
0.9561

3583

PRK13796
0.9429

262722

DEXDc superfamily
0.9373

25663

hypothetical protein
0.9355

23336

SRP40_C superfamily
0.9298

42282

HA2
0.9296

22404

DEXDc superfamily
0.928

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
HELICc superfamily Helicase superfamily c-terminal domain; associated with DEXDc-, DEAD-, and DEAH-box proteins, yeast... - 125.813 2.62E-36 57 - 186 superfamily 238034
HELICc superfamily Helicase superfamily c-terminal domain; associated with DEXDc-, DEAD-, and DEAH-box proteins, yeast... - 125.813 2.62E-36 57 - 186 superfamily 238034
SrmB Superfamily II DNA and RNA helicases [DNA replication, recombination, and repair / Transcription /... - 178.83 6.07E-53 1 - 205 multi-dom 223587

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available Not available Not available Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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