17815 E1_enzyme_family superfamily
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
17815 chr_9 E1_enzyme_family superfamily 666155 668680 - E1_enzyme_family superfamily

Synonyms

NCBI ID Ensembl Genomes exon ID
7453052 Thaps17815.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0346

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0015
 0.38

Most Highly Correlated Transcripts

27435

PAH
0.9443

264072

(HSF43) HSF_DNA-bind superfamily
0.9399

12187

hypothetical protein
0.9316

31437

Peptidase_M16 superfamily
0.9297

11399

hypothetical protein
0.9256

261495

Peptidase_M36
0.9238

596

Adaptin_N
0.9181

24642

PLN02286
0.918

262826

DUF3608 superfamily
0.9172

264318

(Tp_CCHH25) regulator [Rayko]
0.9159

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
E1_enzyme_family superfamily Superfamily of activating enzymes (E1) of the ubiquitin-like proteins. This family includes... - 387.12 3.03E-127 105 - 595 superfamily 266547
UAE_UbL Ubiquitin/SUMO-activating enzyme ubiquitin-like domain; This is the C-terminal domain of ubiquitin-... cl07434 92.2088 4.91E-22 605 - 692 specific 258869
UAE_UbL superfamily Ubiquitin/SUMO-activating enzyme ubiquitin-like domain; This is the C-terminal domain of ubiquitin-... - 92.2088 4.91E-22 605 - 692 superfamily 263346

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_44749 PHATRDRAFT_44749 170432 233774 452826 Cre06.g296983.t1.1 AT2G21470.1 349758

KEGG

KEGG description KEGG Pathway
Ubiquitin mediated proteolysis map04120

GO Terms

GO:0003824 -

GO:0003824

catalytic activity

Details: 
Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic.
GO Category: 
MF

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