17919 COG1741
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
17919 chr_3 COG1741 2336517 2337233 + COG1741

Synonyms

NCBI ID Ensembl Genomes exon ID
7452758 Thaps17919.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0421

Most Highly Correlated Transcripts

bd1941

(bd1941) NA
0.9205

bd410

(bd410) HNHc
0.887

264410

MFS
0.8836

4481

COG1011
0.8774

22979

hypothetical protein
0.8764

260922

Leu_Phe_trans superfamily
0.8739

268652

ATG11 superfamily
0.8691

15819

Arginase_HDAC superfamily
0.8675

240

AAT_I superfamily
0.8661

24281

hypothetical protein
0.8644

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Pirin superfamily Pirin; This family consists of Pirin proteins from both eukaryotes and prokaryotes. The function of... - 110.441 1.52E-30 1 - 96 superfamily 251469
Pirin superfamily Pirin; This family consists of Pirin proteins from both eukaryotes and prokaryotes. The function of... - 110.441 1.52E-30 1 - 96 superfamily 251469
COG1741 Pirin-related protein [General function prediction only] - 130.118 3.23E-36 1 - 232 multi-dom 224655

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_27889 PHATRDRAFT_27889 Not available Not available Not available Cre09.g388208.t1.1 Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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