PHATRDRAFT_53935 ribulose-phosphate 3-epimerase (RPE)
Phaeodactylum tricornutum

   

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_53935	chr_1	ribulose-phosphate 3-epimerase (RPE)	189548	190561	-

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0226

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0107	0.29	1500 220

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
RPE		Ribulose-5-phosphate 3-epimerase (RPE). This enzyme catalyses the interconversion of D-ribulose 5-...	cl17186	324.048	6.00E-112	40 - 255	specific	238244
TIM_phosphate_binding superfamily		TIM barrel proteins share a structurally conserved phosphate binding motif and in general share an...	-	324.048	6.00E-112	40 - 255	superfamily	266538

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
6803		Not available	259733	66186	438704	Cre12.g511900.t1.2	AT5G61410.2	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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