PHATRDRAFT_24362 geranylgeranyltransferase type i beta-subunit (GGTase-I)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_24362 chr_1 geranylgeranyltransferase type i beta-subunit (GGTase-I) 295278 296261 +

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0427

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
GGTase-I Geranylgeranyltransferase types I (GGTase-I)-like proteins containing the protein prenyltransferase... cl08267 350.041 8.62E-120 21 - 327 specific 239225
ISOPREN_C2_like superfamily This group contains class II terpene cyclases, protein prenyltransferases beta subunit, two broadly... - 350.041 8.62E-120 21 - 327 superfamily 263556
Prenyltrans_2 Prenyltransferase-like; Prenyltransferase-like. - 44.278 4.27E-06 198 - 310 multi-dom 257605
Prenyltrans_2 Prenyltransferase-like; Prenyltransferase-like. - 44.278 4.27E-06 198 - 310 multi-dom 257605

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
42828 Not available Not available Not available 439295 Not available AT2G39550.1 298590

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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