PHATRDRAFT_9327 seca_syny3 preprotein translocase subunit seca (secA)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_9327 chr_1 seca_syny3 preprotein translocase subunit seca (secA) 602747 605650 -

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0484

Motif-Guided Biclusters

Normalized Mean Residue
Phatr_bicluster_0137
 0.31

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
SecA_SW superfamily SecA Wing and Scaffold domain; SecA protein binds to the plasma membrane where it interacts with... - 159.273 5.62E-44 704 - 920 superfamily 254253
SecA_SW superfamily SecA Wing and Scaffold domain; SecA protein binds to the plasma membrane where it interacts with... - 159.273 5.62E-44 704 - 920 superfamily 254253
SecA_PP_bind SecA preprotein cross-linking domain; The SecA ATPase is involved in the insertion and retraction... cl03078 138.375 6.73E-38 241 - 357 specific 250319
SecA_PP_bind superfamily SecA preprotein cross-linking domain; The SecA ATPase is involved in the insertion and retraction... - 138.375 6.73E-38 241 - 357 superfamily 261576
secA preprotein translocase subunit SecA; Reviewed - 975.682 0 17 - 934 multi-dom 237257

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
33558 Not available 183536 234817 423357 Cre12.g517900.t1.1 AT1G21650.2 Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

Add comment

Log in to post comments