PHATRDRAFT_31683 chloroplast geranylgeranyl reductase hydrogenase (PLN00093)
Phaeodactylum tricornutum

   

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_31683	chr_1	chloroplast geranylgeranyl reductase hydrogenase (PLN00093)	695635	697195	+

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0177

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0140	0.20	240 21000

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
NAD_binding_8 superfamily		NAD(P)-binding Rossmann-like domain; NAD(P)-binding Rossmann-like domain.	-	591.495	0	4 - 405	superfamily	267487
PLN00093		geranylgeranyl diphosphate reductase; Provisional	-	782.785	0	1 - 418	multi-dom	177713

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
10234		Not available	179770	297804	432259	Cre01.g050950.t1.2	AT1G74470.1	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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